Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGQYDITGKACIMGILNVTPDSFSDGGSYTTIDSALNQVGEMLEQGVAIVDIGGESTRPGAVFVTAEEEIKRVVPMIKAIREVYPDLLLSIDTYKTEVAQAALDAGVHILNDVWSGLYDGKMLSLAAERNVPIILMHNQEEAV------YQDIKKEVCEFLLERAERALEAGVSKDNIWIDPGFGF---AKTEEQNLELLKGLEQVCDLGYPVLFGISRKRTVNYLLGGNREVTERDMGTAALSAWAIAKGCQIVRVHNVEVNKDIVTVISQLV
3TR9 Chain:A ((23-289))-----IVF-SEPAVMGIINVSPNSFYHPH--LDLNSALRTAEKMVDEGADILDIGGEATNPFV-SPSTQIELDRLLPVIDAIKKRF-PQLISVDTSRPRVMREAVNTGADMINDQRALQL-DDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQP--PENRLFGSIAADVLAVYHGASIIRTHDVKATREAIKIATYTR


General information:
TITO was launched using:
RESULT:

Template: 3TR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178938 for 2169 contacts (-82.5/contact) +
2D Compatibility (PS) -28129 + (NN) -16113 + (LL) 720
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -239660.0 ( -110.49 by residue)
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_3TR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TR9-query.scw
PDB file : Tito_Scwrl_3TR9.pdb: