Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHYQTIIIGAGAAGIGFGSAMQRLGLTNFLIIEKGHIGESFLRWPRTTQFITPSFTTNGFGFPDLNAVIPDTSPAFSFEKEHLSGVEYARYLQLVAAHYNLPIQNETSVLSIDKRDSLFVIKTS-KGDFSADYLIMATGEFQNPNTIDIKGADL----GMHYGQVDNFHIKSDNPFIIIGGNESACDALTHLVYLGNQVELYTDTFGRKESNPDPSISLSPLTKERLKHIQDHKKEYYSISEGKKAIEIKQIGKQYQVTFD---DG-STAESFHKPILSTGFLNTCHLIDGIA-LFEYDKNQLPIVTEDDESTIVNNCFLIGPSLRQRDTIFCYIYKFRQRFVPVINHIAQREGIILDEDTLEFFKENQMYLDNLACCDVNCDC |
| 3F8D Chain:A ((14-317)) | -EKFDVIIVGLGPAAYGAALYSARYML-KTLVIGETP-GGQLTEAGIV---------------DDY--------LGL----IEIQASDMIKVFNKHIEKYEVPVLLD-IVEKIENR--EFVVKTKRKGEFKADSVILGIGV--KRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQ------------PIYVETVKKK--PNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDF--AKSNGIETDTNGYIKVDEWMR-TSVPGVFAAGDCTSAWLGF-RQVITAVAQGAVAATSAYRYVTEK---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174734 for 2579 contacts (-67.8/contact) +
2D Compatibility (PS) -31183 + (NN) -9311 + (LL) 4164
1D Compatibility (HY) -10000 + (ID) 2900
Total energy: -223964.0 ( -86.84 by residue)
QMean score : 0.456
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