Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIPNITVETSQGLLIDYAKRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMTNNQYSFLSSSIVKEVARYNGSVSEFVPPEVELALQQKFRQG
4RUK Chain:A ((2-158))--NRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFK--


General information:
TITO was launched using:
RESULT:

Template: 4RUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 753 -103454 -137.39 -658.94
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -137.39
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_4RUK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RUK-query.scw
PDB file : Tito_Scwrl_4RUK.pdb: