Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYRFQRGPVLVVVEDGRISAVDFAGSAC---PDMNLVDLGESTLLPGLVDAHAHLCWDPDGRPE---DLAGDPHAVLVGRARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGHCWFL-------------------------GGVADSVEELVDAVQERAARGADWIKVMATGGFVTTASDPWQPQYGSGQLAAVVAAAEQVGLPVTAHAHATAGIAAAVAAGVDGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIPRVYPE-------MP-ENLV---AVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLVYLS-RHGFTSTEVLTGATAAAAASCGLG-HRKGRIAPGYDADLLAVAAGVDHDPAGL---CDVKAVWRSGTQVPLQASAVGYNTPS |
| 4C65 Chain:A ((47-467)) | ------------AKVTIIYAGLLIPGDGEPLRNAALVISDKIIAFVGSEADIPKKYLRSTQSTHRVPVLMPGLWDCHMHFGGDDDYYNDYTSGLATHP-ASSGARLARGCWEALQNGYTSYRDLAGYG---CEVAKAINDGTIVGPNVYSSGAALSQTAGHGDIFALPAGEVLGSYGVMNPRPGYWGAGPLCIADGVEEVRRAVRLQIRRGAKVIKVMASGGVMSRDDNPNFAQFSPEELKVIVEEAARQNRIVSAHVHGKAGIMAAIKAGCKSLEHVSYADE-------EVWELMKEKGILYVATRSVIEIFLASNGEGLVKESWAKLQALADSHLKAYQGAIKAGVTIALGTDTAPGG-----PTALELQFAVERGGMTPLEAIKAATANAPLSVGPQAPLTGQLREGYEADVIALEENPLEDIKVFQEPKAVTHVWKGGKLFKGPG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199292 for 3514 contacts (-56.7/contact) +
2D Compatibility (PS) -40463 + (NN) -17374 + (LL) 1328
1D Compatibility (HY) -14800 + (ID) 5450
Total energy: -276051.0 ( -78.56 by residue)
QMean score : 0.433
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