Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MSASEFSRAELAAAFEK-----------FEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTT--------FPGSHMVAFPSLWSVIDESTGRI--ICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKA-------------QELGTLDEDAARWMRRHGGP |
| 1AUO Chain:A ((1-218)) | MTEPLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELELSASQQRIPALCLHGQ----YDDVVQNAMGRSAFEHLKSRGVTVTWQEYPMGHEVLPQEIHDIGAWLAARLG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30069 for 1142 contacts (-26.3/contact) +
2D Compatibility (PS) -17693 + (NN) -9497 + (LL) 292
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -59767.0 ( -52.34 by residue)
QMean score : 0.357
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