Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSARGGSLHGRVAFVTGAARAQGRSHAVRLAREGADIVALDICAPVSGSVTYPPATSEDLGETVR-AVEAEGRKVLAREVDIRDDAELRRLVADGVEQFGRLDIVVANAGVLGWGRLWELTDEQWETVIGVNLTGTWRTLRATVPAMIDAGNGGSIVVVSSSAGLK----ATPGNGHYAASKHALVALTNTLAIELGEFGIRVNSIHPYSVDTPMIEPEAMI-QTFAKHPGYVHSFP-PMPLQPKGFMTPDEISDVVVWLAGDGSGALSGNQIPVDKGALKY |
| 4RGB Chain:A ((21-291)) | -----GSLDGRVVFITGAARGQGRSHAVMCAEQGANIVGVDICEDIDI-VPYKLGTYEE-LEETARLVEKTGQEMLFRKADVRDKAVLQEVFDAGVEQFGHIDTVIANAGVVLTNPDERDASEALRLGLDIMLIGVWNTFQVAIPHMKERGQGGNLIATSSMIALLDLTDGRGGTDAYLTSKLAITGLVRSYALMLAADRIRVNGVAPTNCSTPMITENPALFKVIEENPHLVNAMSTALPDFP--MIEPRDVSNAILFLISDAGRSFTGSVLKVDAGMD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134010 for 2363 contacts (-56.7/contact) +
2D Compatibility (PS) -28335 + (NN) -12724 + (LL) 448
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -199071.0 ( -84.25 by residue)
QMean score : 0.471
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