Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPHVITQSCCNDA--SCVFACPVNCIHPTPDE----PGFAT--------SEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGSGPAAMYAADELLVQQGVQVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDRIAGHRRFRFYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELVAWLNGHPDFND---LPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVAARRGPAHSAFTLPELIGLTAGADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGSAPARRVGRPRIRLAYRLTPRRVLGQR--RAGGVQ-----FSV----------TGTDELRQLDAGLVLTSIGYRGKPIPDLPFDEQAALVPNDGGRVI-DPG-TGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALVADFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSAPKEPLRRRVLARLRDLGQPIVLTVPL |
| 4YLF Chain:B ((35-463)) | ----EAQRCLQCPTHPCVSGCPVEIDIPGFIRKLRDGKLEESYRILKSYNNLPAVCGRVCPQEVQCESRCVVGKMKDSEP--VAIGRLERFVADWAAENLE-E--------DVKP-L----AGSKKEKVAVVGSGPAGLTAAADLAK-MGYHVDIFEAFHKPGGVLVYGI-PEFRLPKRIVEREVSYIRKLGVNFHLNTVVGKTVKVKELLSEYDAVFIGTGAGTPKFMGIPGTNLNGVYSANEFLTRVNLMKAYLFPEYDTPIRVGKKVAVIGAGNTAMDAARSALR--------------------LGAEKVYIVYRRTEREMPARREEYHH------------------------------------------------ALEEGIEFLWLTLPIRYIGDANGNVEAMECVRMELKEADGSGRPRPVPIEGSNFVLEVDMVIEAIGQGPNRV---LLSEFPGLELNERGYIKADEDTGATSVKGVFAGGDIVTGAAT-VIKAMGAGKKAAQFIHSYLTGEW---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202161 for 3370 contacts (-60.0/contact) +
2D Compatibility (PS) -42022 + (NN) -17558 + (LL) 12072
1D Compatibility (HY) -11600 + (ID) 4300
Total energy: -265569.0 ( -78.80 by residue)
QMean score : 0.340
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