Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFGLRLAEAKAR-RGPLCLGIDPHPELLRGWDLAT--------------------------------------------TADGLAAFCDICVRAFADF-AVVKPQVAFFESYGAAGFAVLERTIAELRAADVLVLADAKRGDIGATMSAYATAWVGDSPLAADAVTASPYLGFGSLRPLLEVAA-AHGRGVFVLAATSNPEGAAVQNAAA-DGRSVAQLVVDQVGAANEA-A-GPGPGSIGVVVGATAPQA---PDLSAFTGPVLVPGVGVQGGRPEALGGLGGA-ASSQLLPAVAREVLRAGPGVPELRAAGERMRDAVAYLAAV |
| 2FDS Chain:A ((20-336)) | --HFKTKLKNRRNEVNTCLCIGLDPDEDDIKNFMRNEEKNGYKNVKNNMNNNNRIENVIKIGKEILLTDEENIENLSEEDKFFYFFNHFCFYIINNTKEYALIYKMNFAFYIPYGSVGINALKNVFDYLNSMNIPTMLDMKINDIGNTVKNYRKFIFEY--LKSDSCTINVYMGTSMLKDICFDYEKNKYYSAYVLIKTTNKDSFIFQNELSINDKQAYIVMAEETQKMATDLKIDQNNEFIGFVVGSNAFEEMKIIRNKFPDSYILSPGI-----DLYKTLKNGYNKDYEKLLINVGRAITKSPNPKK----SSESYYNQIIQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161917 for 2111 contacts (-76.7/contact) +
2D Compatibility (PS) -27767 + (NN) -6448 + (LL) 1068
1D Compatibility (HY) -14800 + (ID) 2550
Total energy: -212414.0 ( -100.62 by residue)
QMean score : 0.443
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