Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDKLHWLAMHGVIRGIAAIGIRRGDLQARLIADPAVATDPVPFYDEVRSHGALVRNRANYLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAVEPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQPGIVDVVGRYCSQLPIVVISEILGVPEHDRPRVLEFGELAAPSLDIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIAESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQHPELWPNTVEEILRLDSPVQLTA--RVACRDVEVAGVRIKRGEVVVIYLAAANRDPAVFPDPHRFDIER-PNAGRHLAFSTGRHFCLGAALARAEGEVGLRTFFDRFPDVRAAGAGSR---RDTRVLRGWSTLPVTLGPARSMVSP |
| 2YCA Chain:A ((103-415)) | --------------------------------------------------------------------------------------------------------------LLSMDPPEHSRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAE-----EMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQ---ARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTPN--QHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPV----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185179 for 2334 contacts (-79.3/contact) +
2D Compatibility (PS) -32786 + (NN) -14946 + (LL) 8468
1D Compatibility (HY) -17600 + (ID) 5700
Total energy: -247743.0 ( -106.15 by residue)
QMean score : 0.495
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