Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGLAAGF-DKDGTALSSWGAMG-FGYAEIGTVT--AHPQPGNPAPRLFRLADDR-ALLNRMGFNNHGARALAIRLARHRPE---------IPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRD-------LQAVESLRPILSAVRAETSTPVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSRDGLTTP-----GVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS |
| 1D3G Chain:A ((1-367)) | MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTS-----------LGLLPFQDSDMLEVRVLGHKFRNPVGIAAG-FDKHGEAVDGLYKM-GFGFVEIGSVTPK--PQEGNPRPRVFRLPED-QAVINRYGFNSHGLSVVE-HRLRARQQKQAKLTEDGLPLGVNLGKNKTSV--DAAEDYAEGVRVLGPLADYLVVNVSSPNTA----GLGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTV-SRPA---GLQGA--LRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHR--R- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183022 for 2900 contacts (-63.1/contact) +
2D Compatibility (PS) -35573 + (NN) -20157 + (LL) 1672
1D Compatibility (HY) -25200 + (ID) 6800
Total energy: -269080.0 ( -92.79 by residue)
QMean score : 0.546
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