Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIRWHIQLGNIVIPKSVNPMRIASNFDAFDFPRSMTEPGLVRIRKPSISQAGEMT
4GAC Chain:A ((247-300))
ILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYIVP--
General information:
TITO was launched using:
RESULT:
Template:
4GAC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4780 for 246 contacts (-19.4/contact) +
2D Compatibility (PS) -5678 + (NN) -183 + (LL) 260
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -15331.0 ( -62.32 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_4GAC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GAC-query.scw
PDB file :
Tito_Scwrl_4GAC.pdb
: