Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTAAPRWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLRTAARRCPEATFLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGT--PDDPIEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWL-LLAKGGGDTEVSAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTKIRKLQAPSTDPDVITAAARHVLDLF-E-LDRPVRLLGVRLELA |
4TQR Chain:A ((2-339)) | -------IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRT-R-VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI--PKAIHVVAVTEDLDIVSRGRTFPHGISK-ETAYSESVKLLQKILEEDERKIRRIGVRFSK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217861 for 2589 contacts (-84.1/contact) +
2D Compatibility (PS) -36435 + (NN) -20736 + (LL) 800
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -299982.0 ( -115.87 by residue)
QMean score : 0.480
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