Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPE-----HRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGHAV----TPEKAADKILAGVTRNRYLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
| 2D1Y Chain:A ((3-224)) | --------LFAGKGVLVTGGARGIGRAIAQAFAREGALVAL------------CDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--LEAIA--------RRDWEDL--HALRRLGKPEEVAEAVL------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148693 for 1736 contacts (-85.7/contact) +
2D Compatibility (PS) -21457 + (NN) 196 + (LL) 5300
1D Compatibility (HY) -10400 + (ID) 3950
Total energy: -179004.0 ( -103.11 by residue)
QMean score : 0.500
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