Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGG--GRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLIDHPV--R---PRRLGDLLPDAFGLDDLPRERR
3DMO Chain:A ((10-137))
----THHALIEAAKAAREKAYAPYSNFKVGAALVTNDGKVFHGCNVENASYGLCNCAERTALFSALAAGYRPGEFAAIAVVGETHGPIAPCGACRQVMIELGKPTLEVVLTNMQGDVRVTSAGDLLPDAFYL--------
General information:
TITO was launched using:
RESULT:
Template:
3DMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85989 for 974 contacts (-88.3/contact) +
2D Compatibility (PS) -13390 + (NN) -5327 + (LL) 472
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -113284.0 ( -116.31 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_3DMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DMO-query.scw
PDB file :
Tito_Scwrl_3DMO.pdb
: