Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNETASHGINFDALGRDRQSLDLASESVELEVPGLNLFYGAKQALFDVRMNIPKQRVTAFIGPSGCGKSTLLRCFNRMNDLVDGC---RVEGEIRLDGHNIFAKGVDVAEL----RRRVGMVFQKPNPFPK-SIYENVVYGL--RIQGI-----NKKRVLDEAVEWALKGAALWEEVKDRLHESALGLSGGQQQRLVIARTIAVEPEVLLLDEPCSALDPISTLKIEELIYELKSK--FTIVIVTHNMQQAARVSDYTAFMYMGKLIEFGDTDTLFTNPAKKQTEDYITGRYG |
| 3TIF Chain:B ((20-223)) | --------------------------------------------ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNII--------GCLDKPTEGEVYID--NIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALE-----CLKMAELEERFANHKPNQ---LSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEV--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -135381 for 1449 contacts (-93.4/contact) +
2D Compatibility (PS) -20381 + (NN) -8994 + (LL) 4744
1D Compatibility (HY) -12000 + (ID) 3800
Total energy: -175812.0 ( -121.33 by residue)
QMean score : 0.537
|
|
|