Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNDEVLLSIKNLKQYFNAGKKNEVRAIENISFDIYKGETLGLVGESGCGKSTTGKSIIKLNDITSGEILYEGIDIQKI------RKRKDLLKFNKKIQMIFQDPYASLNPRLKVMDIV--AEGIDIHHLATDKRDRKKRVYDLLETVGLSKEHANRYPHEFSGGQRQRIGIARALAVEPEFIIADEPISALDVSIQAQVVNLLLKLQRERGITFLFIAHDLSMVKYISDRIAVMHFGKIVEIGPAEEIYQNP--LHDYTKSLLSAIPQPDPESERSRKRFSYIDDEANNHLRQLHEIRPNHFVFSTEEEAAQLRENKLVTQN |
| 2FF7 Chain:A ((25-246)) | ---------------------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTI--------VGEQGAG-----LSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR--TVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQS---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79313 for 1615 contacts (-49.1/contact) +
2D Compatibility (PS) -21603 + (NN) 302 + (LL) 6708
1D Compatibility (HY) -12400 + (ID) 3950
Total energy: -110256.0 ( -68.27 by residue)
QMean score : 0.381
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