Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDF---GI--TDVIILEK-GTVGHSFKHWPKSTR------TITPSFTSNGFGMPDMNAISMDTSPAFTF-------NEEHISGETYAEYLQVVANHYELN--IFENTVVTNISAD--DAYYTIATTT------ETYHADYIFVATGDYNFPKK---P--F---KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFV--TTNQDIKLT--THDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 2XVE Chain:A ((3-350)) | ---TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPK--EC--LEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY----------KWPEN----------W--DERPNLVRVDT----ENAYFADGSSE-KVDAIILCTGYIHHFPF-LNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYS-----FNMFDAQAWYARDVIMGRLPLPSKEEMKA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135962 for 2410 contacts (-56.4/contact) +
2D Compatibility (PS) -33700 + (NN) -19669 + (LL) 3428
1D Compatibility (HY) -7600 + (ID) 2850
Total energy: -196353.0 ( -81.47 by residue)
QMean score : 0.471
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