Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQSLAKQVIHQAVEVNAQDIYIIPKGDCYELYMRIDDERRFID--VFEFNRMASLISHFKFVAGMNVGEKRRSQLGSCDYELSEGRLVSLRLSSV-G-DYR-GQESLVIRILYSGHQD-----LKYWFD-----------------------N-IKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLASEVFKNKQIITIEDPVEIKNDKML-------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVM-VFSTIHAKSISGVYDRLIELGVN------------YQELENSLKLIAYQRLIGGG----SLIDFETGNFKKHSSDKWNRQVDILAEEGHISKKQAQVEKIIPQETTESSPTF |
| 2GZA Chain:A ((26-346)) | -----LEPLRPWLDDPQITEVCVNRPG---EVFCERASAWEYYAVPNLDYEHLISLGTATARFVDQDISDS----RPVLSAILPMG----ERIQIVRPPACEHGTISVTIRKPSFTRRTLEDYAQQGFFKHVRPMSKSLTPFEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHLFYP--------VTAATLLRSCLRMKPTRILLAELRGGE-AYDFINVAASGHGGSITSCHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGVHDGTGRHISEVWYDPNTKRAL-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150960 for 1870 contacts (-80.7/contact) +
2D Compatibility (PS) -26946 + (NN) -7474 + (LL) 4740
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -191740.0 ( -102.53 by residue)
QMean score : 0.426
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