Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEILIAGGSGFLGKQIIKAALTKGH-KVAYLSRHEGKGDIFKDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPNQLDELNVKATQKAVALCHKNQIPKLVYISANSG----YSAYIKSKRKAEQIIKASGLDYLFVRPGLMYGEERPLSIFQAKCIKLFSHLPFLGIVVQKVFPTKVVIVAEAIVTTLRKKPTQKILSIEELNNK
3E48 Chain:A ((1-188))
MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPS---FKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLP---ELMNM-HKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSY
General information:
TITO was launched using:
RESULT:
Template:
3E48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84331 for 1373 contacts (-61.4/contact) +
2D Compatibility (PS) -20003 + (NN) -11609 + (LL) 608
1D Compatibility (HY) -9600 + (ID) 1300
Total energy: -126235.0 ( -91.94 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3E48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E48-query.scw
PDB file :
Tito_Scwrl_3E48.pdb
: