Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGK-VNFHDIEILSDDKGAPLITKEPF-NGKSFVSISHSGNYAQASVILEEEK
1F7L Chain:A ((1-118))
GIYGIGLDITELKRIASMAGRQKRFAERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIRKDQNGKPYIICTKLSPAAVHVSITHTKEYAAAQVVIER--
General information:
TITO was launched using:
RESULT:
Template:
1F7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47944 for 853 contacts (-56.2/contact) +
2D Compatibility (PS) -12768 + (NN) -6474 + (LL) 88
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -79398.0 ( -93.08 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1F7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F7L-query.scw
PDB file :
Tito_Scwrl_1F7L.pdb
: