Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNNNFLLSYACFPNKTRGRYFKEQEDENRSCFQRDRDRIIHSNAFRKLEYKTQVFIN---YEHDYYRTRLTHSLEVAQIARSIARRLGL-DEDITECIALAHDLGHPPFGHTGENALKRAVQDLNLDNEKYEFDHNVQAIRILTYLEQK-HADFDGMN--LSWEVVEGVAKHNGPLLGRNAVSYTNNQLLLEYNEKYNLKLEEFSSIEAQVAS---IADDIAYSVHD-LDDELRANLVTIEDLLNIPLIGKTFKDVESRYSELPQNKLIHESLSRTIGMMISDVVSQTEKNIEDYKIKSVEDVRSLNKMLVTFSPEVANATKEVKKFNMEKIYRSYKLNRTMNKAKRIVEELFQCFYENPRLLPIEWNKLAHKFQRSVVICDYISGMTDRFAIHEHRRIFDTSYEMTSF |
| 2HEK Chain:A ((17-187)) | ----------------------------------EAGLRLIDSFPFQRLRYVKQLGLAYLVFPSA-QHTRFEHSLGVYHITERICESLKVKEKELVKLAGLLHDLGHPPFSHTTEVLLPR------------ERSHEDFTERVIKETEIYEILKQ-DYSHEDIERLVRITLGKPED---------------------------EEEKLLSEIITGEFGSDRMDYLRRDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKLISQEDFTDINNFLRLNDAFVISELFKRKAFREDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEKVRFDEVEKEVYGGNIYVLSSEGLKKAHELSPLIASLKPIKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31896 for 1180 contacts (-27.0/contact) +
2D Compatibility (PS) -17165 + (NN) -4018 + (LL) 4416
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -59463.0 ( -50.39 by residue)
QMean score : 0.379
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