Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSITLHSQKDFEFMRKAGRLAAETLDFIAPYVKVGVTTNKLNDLCHDFIVKAGAIPAPLNYKGYPKSICTSKNAVVCHGIPDDKPLKDGDILNIDVTVILNGWYGDTSRMFWAGKPSIKAKRLCDATYVALMEAIKQVKPGNKLNEIGLAVEKYIRDFGYSIVRSYCGHGIGKVFHAPPNVVHFYDQGESLVLKEGMFFTIEPMINAGKHETLLSRLDNWTVTTRDLSLSAQFEHTLGVTEDGVEIFTLSPKNWHFPPYN
3PKA Chain:A ((37-285))SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEI-WDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTCL----------


General information:
TITO was launched using:
RESULT:

Template: 3PKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153294 for 2232 contacts (-68.7/contact) +
2D Compatibility (PS) -27213 + (NN) -10503 + (LL) -120
1D Compatibility (HY) -16800 + (ID) 5750
Total energy: -213680.0 ( -95.73 by residue)
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_3PKA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PKA-query.scw
PDB file : Tito_Scwrl_3PKA.pdb: