Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MRKEIRNLKI---------------ASVLRRAISKVLMEGKVFNKNVVISDVKLSGDLKKADVYIVLSSLSKKKYNINTVVDEINQSAWLIRKSILSYVDL--RFIPKLVFKADLAFDNFVNISKILSNYT
1BS2 Chain:A ((5-135))
ANMISQLKKLSIAEPAVAKDSHPDVNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRLRIKGANPKDLAVQWAEK--FPCGDFLEKVEANGPFIQFFFNPQFLAKLVIPDILTRKEDYG
General information:
TITO was launched using:
RESULT:
Template:
1BS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57744 for 764 contacts (-75.6/contact) +
2D Compatibility (PS) -11610 + (NN) 776 + (LL) 300
1D Compatibility (HY) -7600 + (ID) 1000
Total energy: -76878.0 ( -100.63 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1BS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BS2-query.scw
PDB file :
Tito_Scwrl_1BS2.pdb
: