Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIASDAVNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN
4ECP Chain:A ((9-161))
-------------DVTIEIP-KGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALVLLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVN--DHRWDHIHGIIDVPTFELDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFK
General information:
TITO was launched using:
RESULT:
Template:
4ECP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67382 for 1136 contacts (-59.3/contact) +
2D Compatibility (PS) -16533 + (NN) -4067 + (LL) 1488
1D Compatibility (HY) -12400 + (ID) 3600
Total energy: -102494.0 ( -90.22 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_4ECP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ECP-query.scw
PDB file :
Tito_Scwrl_4ECP.pdb
: