Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKTTKNLLITEINKILPE-D-SQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEG---SNKRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATD-KQRRALYNYGVNLGLIFQAKDDIRDYKQDEV-NNLMSMLSKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQVKRDD |
| 3P8R Chain:A ((7-291)) | ----SYQQRNNQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDD--------------EATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENR----------------------------------LISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD--KSTYPALLGLEGAQQKAHTLLQEALLALEAIPYNTEHLEEFARYVVERK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165084 for 2107 contacts (-78.4/contact) +
2D Compatibility (PS) -26323 + (NN) -8300 + (LL) 3152
1D Compatibility (HY) -16000 + (ID) 4250
Total energy: -216805.0 ( -102.90 by residue)
QMean score : 0.546
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