Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLIAAAIAIGLSALGAG----------IGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIGVVIAFMTFAG
3ZK2 Chain:B ((4-77))
--LTAKTIVLGCSAVGAGLAMIAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALI----
General information:
TITO was launched using:
RESULT:
Template:
3ZK2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20631 for 307 contacts (-67.2/contact) +
2D Compatibility (PS) -6266 + (NN) 28 + (LL) 284
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -34085.0 ( -111.03 by residue)
QMean score : 0.083
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK2-query.scw
PDB file :
Tito_Scwrl_3ZK2.pdb
: