Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFN----KDFHSNNGLSDQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLD--TLKSARNKAQYFQKMMRD-YLDTDDVTSLSTDDILMLMAKLKQSRGPSKGLDLIYAP-IKTDYIQND--------YPTTKPIFACYTKDEGDIYITSEQK--KLSPQRFIDIME-LN----D--IPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQHLNIQDSN-AQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQ-YPTTAHLKFLSRQMQNDLANFAKSGKM-------PWPMYHNERRYYRTYQ |
| 2OGT Chain:A ((4-478)) | TVVETRYGRLRGEMNEGVFVWKGIPYAKAPVGERRFLPPEPPDAWDGVREATSFGPVVMQPS---------------PSEDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQA-GNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGSLLLRSPETAMAMTERILDKAGIRPGDRERLLSIPAEELLRAALSL--------GPGVMYGPVVDGRVLRRHPIEALRYGAASGIPILIGVTKDEYNLFTLTDPSWTKLGEKELLDRINREVGPVPEEAIRYY------WQTWLRIMTYRVFVEGMLRTADAQA---AQGADVYMYRFDYETPV-------CHALELPFVFHNLHQPGVANFVGNRPEREAIANEMHYAWLSFARTGDPNGAHLPEAWPAYTNERKAAFVFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224281 for 3567 contacts (-62.9/contact) +
2D Compatibility (PS) -43867 + (NN) -21947 + (LL) 2000
1D Compatibility (HY) -21600 + (ID) 5550
Total energy: -315245.0 ( -88.38 by residue)
QMean score : 0.460
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