Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEITKAKNLGEWLDMRLGTNNLVKVLMTEYWIPKNINFLWAMGVILLTLLGVLVISGIFLLMYYKPDAKMAFDSVNFTIMQEVAYGWLWRHMHATAASMIFVIIYIHMFVGIYYGSYKKGREMIWISGMILFVVFSAEAFSGYMLPWGQMSYWAAAVITNLFGGIPFIGADVVEWIRGNYVVADSTLTRFFMLHVFLLPIAIILLVGVHFYSLRILHVNNQEGEEIDFELEEKKFIEGKKKESKVIPFWPVFLSKDIFVVCTFMVFFFYLVCYQYDFAMDPINFERGNSLKTPPHIYPEWYFLWSYEVLRGFFFSADLGLMAFGVAQVIFFLLPFLDRSPVVAPAHKRPAFMVWFWLLIIDMIVLTIYGKLPPLGIGKYIGLFGSITFLALFFVVLPIITIAERKKQGGVR |
1BCC Chain:C ((2-380)) | ----A-PNIRKSHPLLKMINNSLI-----DLPAPSNISAWWNFGSLLAVCLMTQILTGLLLAMHYTADTSLAFSSVAHTC-RNVQYGWLIRNLHANGASFFFICIFLHIGRGLYYGSYL--YKETWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTLTRFFALH-FLLPFAIAGITIIHLTFLHESGSNNPLG---------------ISSDSDKIPFHPYYSFKDILGLTLMLTPFLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP-NKLGGVLALAASVLILFLIPFLHKSKQRTMTF-RPLSQTLFWLLVANLLILTWIGSQPVEHPFIIIGQMASLSYFTILLILFPTIGTLENKMLNY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343884 for 2915 contacts (-118.0/contact) +
2D Compatibility (PS) -38717 + (NN) -17094 + (LL) 3548
1D Compatibility (HY) -35600 + (ID) 7300
Total energy: -439047.0 ( -150.62 by residue)
QMean score : 0.354
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