Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGEESAITMNIPLVSAI-MQAVSDDNM-GIALATEGGVSFIFGSQ-SIESEAAMVSRVKNHKAGFVISDSNISPDKTLQDILDL-KEKTGHSTVAVTEDGTAHGKLLGIVTSRD-YRVTRMSPDEKVADF-MTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSNKENKLELLDSSKRYVVGAGINTR-DYEERVPALVEAGADILCIDSSEGYSEWQKRTLDYVRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICITREQKGIGRGQATALIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFI-MLGRY-FSRFDESPTNKVNLNGTYMKEYWG-EGANRARNWQRYDLGG-DKKLSFEEGVDSYVPYAGSLKDNVAIS-LSKVRSTM-CNCGALNIPELQQKAKITLV-SSTSIVEGGAHDVVVKDASNNLIK |
| 1ZFJ Chain:A ((1-490)) | SNWDTKFLKKGYTFDDVLLIPAESHVL--PNEVDLKTKLAD-------NLTLNIPIITAAMDTVT--GSKMAIAIARAGGLGVIH-KNMSITEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRY-RISGVPIV-ETLANRKLVGIITNRDMRFIS--DYNAPISEHMTSE--HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPN-RTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREY------GKTIIADGGIKYSGDIVKALAAGGNAVMLGS--MFAGTDEAPGETEIYQGRKYKTYRGMGSIA-----------AMKKNKLVPEGIEGRVAYKGAASDIVF-QMLGGIRS-GMGYVGAGDIQELHENAQFV-EMSGAGLIESHPHDVQITNEAPNYS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168139 for 3870 contacts (-43.4/contact) +
2D Compatibility (PS) -49895 + (NN) -15723 + (LL) 2752
1D Compatibility (HY) -19600 + (ID) 7500
Total energy: -258105.0 ( -66.69 by residue)
QMean score : 0.455
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