Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGF-FAKEELADFSAFGSRIIGHPNNK-VAGIEMNTGSLGHGLSVSVGMALAAKMDG----------KSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEA-DG-NNPDKLQAIFKTVNE-TGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE |
| 1R9J Chain:A ((3-280)) | MASIEKVANCIRCLAADIVQGGKSGHPGTPMGMAPMSAVLWTEVMKYNSQDPDWVDRDRFVMSNGHGCALQYALLHMAGYNLTMDDLKGFRQDGSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYISIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKATKGKPKMIVQTTTIGFGSSKQ-GTEKVHGAPLGEEDIANIKAKFG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96415 for 2358 contacts (-40.9/contact) +
2D Compatibility (PS) -28579 + (NN) -13222 + (LL) 1040
1D Compatibility (HY) -12000 + (ID) 3950
Total energy: -153126.0 ( -64.94 by residue)
QMean score : 0.491
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