Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
3UWB Chain:A ((2-150))
---SLKIKTIGDRCLRQKSEEVEF-DKKEMSELYDQMCEAM--WA----------SDGIGLAAPQVGINKRVIVVDETTEEHGKYAHLMVNPKITWKSEE--KVLFDEGCLSVPDQNG-EVLRPKSIKVTFQNKDGKYKKWKLDGLAARVVQHEIDHLEGILFVDYFN---------------
General information:
TITO was launched using:
RESULT:
Template:
3UWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58241 for 1151 contacts (-50.6/contact) +
2D Compatibility (PS) -15791 + (NN) -3720 + (LL) 1148
1D Compatibility (HY) -10000 + (ID) 2550
Total energy: -89154.0 ( -77.46 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_3UWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWB-query.scw
PDB file :
Tito_Scwrl_3UWB.pdb
: