Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDVEKARITALLHDYAKYYDDDKARKIIE------DEGYD-PRLLSFHHSLWHAPVGAYLAEKEFGITDTEILEAIRLHTTGS--ATMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY
3M1T Chain:A ((103-227))
--------------LADFWGNTFEVAIICQELAKRLGTLPEEAFTCGILHSIGELLIVNGDPAVAATISAAVADGADRNLMEKELLGYDNAEIGALLAQS-WKFT-PHLVKGIQFQNHPKSAEPYSKLAGMLAMAKQIAAD-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3M1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48296 for 874 contacts (-55.3/contact) +
2D Compatibility (PS) -12601 + (NN) -5870 + (LL) 6260
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -67907.0 ( -77.70 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_3M1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M1T-query.scw
PDB file :
Tito_Scwrl_3M1T.pdb
: