Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILLIGASGTLGSAVKDRLEK-KAEVITAGRHSG--------------DVTVDITSIDSIKKMYEQ----VGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKL--------------------ESFFQGFVPVPAAKVARAFEKSVFGA---QTGESYKVY |
| 3WDS Chain:A ((13-257)) | RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88414 for 1692 contacts (-52.3/contact) +
2D Compatibility (PS) -20937 + (NN) -1849 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 2250
Total energy: -118650.0 ( -70.12 by residue)
QMean score : 0.450
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