Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHSKNG-----------YYDGLIFHRVIPEFMIQGGD-PDGRGTGGESIWGESFEDEFSTEAFNLRGALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK------------------------------------------------------------------------------------------------------------------ |
| 1IIP Chain:A ((2-298)) | SHPSPQAKPSNPSNPRVFFDVDIGG-ERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITT---------------------------VPTPHLDGKHVVFGQVIKGMGVAKILENVEVK-GEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -42425 for 1341 contacts (-31.6/contact) +
2D Compatibility (PS) -17295 + (NN) -5355 + (LL) 2340
1D Compatibility (HY) -7600 + (ID) 3650
Total energy: -73985.0 ( -55.17 by residue)
QMean score : 0.483
|
|
|