Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRIPGTTFKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGNGEVNEAGLKFYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNGRVKYWVTLNEQNVFISHGYKLAYHPPGVSDDKRMFAANHNANLANASAIAKFRELGTSGKIGPSFAYGPSYSIDAN-PANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGLAPEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVPGLYKNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYK-L-PIMITENGLGEYDSLTEDHKIHDEYRIEYIRAHALAIQEAITDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDENDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK |
3W53 Chain:A ((41-504)) | ----QKFAWPKEFLWGSATAAAQIEGAGHSYGKEDSVWDAFARKEGAIAGGENLEVAVDHYHRYREDVQLMRELGLDSYRFSTSWARVVPGG-RTVNPEGLDFYSRLVDELLENGILPWLTLYHWDLPQALEER-GGWTNRETSYKFLEYAETVHEKLGDRVKHWTTFNEPLCSSLIGYAAGEHAPGRQEPQAALAAVHHQHLAHGLATARLRELGA-EHIGITLNLTNAVPNNPGDPVDLEAARRVDALWNRMYLDPVLRGSYPEDLLEDVQGLGLAEVIEAGDLEII-SQPIDFLGVNHYHDDNVSGHPLPAGQPQ-PVVPTDSPKSS-PFVGSEYVTFPARDLPRTAMGWEVNPEGLRVLLNRLNQDYANLPSLYITENGASYTDTVTEAGTVEDPEREEYILNHLDAVVRAIADGVDVRGYFVWSLLDNFEWAWGYAKRFGIIHVDYQT-----QVRTIKNSGKAYAGLIAANRT-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116052 for 4178 contacts (-27.8/contact) +
2D Compatibility (PS) -49312 + (NN) -19525 + (LL) 1116
1D Compatibility (HY) -24000 + (ID) 8900
Total energy: -216673.0 ( -51.86 by residue)
QMean score : 0.416
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