Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLKDKNIFITGSSRGIGLAIAHQFAQLGANIVLNGRSEISE-DLIAE-FADYGVKVIAISGDVSSFEDANRMIKEAIASLGSVDVLVNNAGITNDK---LMLKMTVEDFESVLKINLTGAFNMTQSVLKPMTKARQGAIINISSVVGLTGNVGQANYAASKAGLIGFTKSVAREVAARGIRVNAIAPGFIESDMTDVIP--EKMQEAILAQIPMKRIGKGKEVAQVASFLAE--QEYLTGQVIAIDGGMTMQ |
2CFC Chain:A ((2-250)) | ----SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYTAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118882 for 2086 contacts (-57.0/contact) +
2D Compatibility (PS) -25764 + (NN) -5075 + (LL) 568
1D Compatibility (HY) -16800 + (ID) 4300
Total energy: -170253.0 ( -81.62 by residue)
QMean score : 0.579
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