Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHYQTIIIGAGAAGIGFGSAMQRLGLTNFLIIEK-GHIGESFLRWPRT-TQFITPSFTTNGFGFPDLNAVIP-DTSPAFSFEKEHLSGVEYARYLQL------------VAAHYNLPIQNETSVLSIDKRDSLFVIKTSKGDFSADYLIMATGEFQNPNTIDIKGADL--GMHYGQVDN-FHIKSDNPFIIIGGNESACDALTHLVYLGNQVELYTDTFGRKESNPDPSISLSPLTKERLKHIQDHKKEYYSISEGKKAIEIKQIG-KQYQV---TFDDGSTAESFHKPILSTGFLNTCHLIDGIA-LFEYDKNQLPIVTEDDESTIVNNCFLIGPSLRQRDTIFCYIYKFRQRFVPVINHIAQREGIILDEDTLEFFKENQMYLDNLACCDVNCDC |
| 1MO9 Chain:A ((42-379)) | -REYDAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWPFLGGSCPHNACVPHHLFSDCAA--ELM--LARTFSGQYWFPDMT--EKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN----HTVEAAGKVFKAKNLILAVGA--GPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-------KDNETRAYVLDRMKE--QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAEL-AKILGLDLGPKGEVLVNEYLQ-TSVPNVYAVGDLIGGPMEM----FKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -157107 for 2571 contacts (-61.1/contact) +
2D Compatibility (PS) -33159 + (NN) -66 + (LL) 1104
1D Compatibility (HY) -6800 + (ID) 2550
Total energy: -198578.0 ( -77.24 by residue)
QMean score : 0.441
|
|
|