Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVVKVGINGFGRIGRLAFRRIQN--VEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGQFVKVSAEREPANIDWATDGVEIVLEATGFFASKEKAEQHIHENGAKKVVITAPGGNDVKTVVFNTNH-DILDGTETVISGASCTTNCLAPMAKALQDNFGVKQGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVATLEKDVTVEEVNAAMKAAA----NDSYGYTEDPIVSSDIVGISYGSLFDATQTKVQTVDGNQLVKVVSWYDNEMSYTSQLVRTLEYFAKIAK
1HDG Chain:O ((1-332))--ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQA-GAKKVIITAPAKGEDITVVIGCNEDQLKP-EHTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHK--DLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITN---VIGGKLVKVASWYDNEYGYSNRVVDTLELLLKM--


General information:
TITO was launched using:
RESULT:

Template: 1HDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126443 for 2864 contacts (-44.1/contact) +
2D Compatibility (PS) -34964 + (NN) -12619 + (LL) 376
1D Compatibility (HY) -31200 + (ID) 8700
Total energy: -213550.0 ( -74.56 by residue)
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_1HDG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HDG-query.scw
PDB file : Tito_Scwrl_1HDG.pdb: