Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE-KLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL---RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLV
2CFC Chain:A ((1-249))--MSRVAIVTGASSGNGLAIATRFLARGDRVAALD-LSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYTA--


General information:
TITO was launched using:
RESULT:

Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1389 -146747 -105.65 -598.97
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -105.65
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.645

(partial model without unconserved sides chains):
PDB file : Tito_2CFC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CFC-query.scw
PDB file : Tito_Scwrl_2CFC.pdb: