Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIATEAVMKQEVYQVNGMNLWYGQHHALK---NINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQMTPNVKLAGELNYNGSNILK-----------------DKVDIVDLRKNIGMVFQKGNPFPQ-SIFDNVAYGPRVHGT-KNKKKLQEIVEKSLKDVALWDEVKDRLHTSALSLSGGQQQRLCIARALAT-NPDILLMDEPTSALDPISTRKIEELILELKDK-YTIVIVTHNMQQAARVSDQTAFFYM-GELVECDNTNKMFSNPK-DQRTLDYISGKFG---
1B0U Chain:A ((5-261))-----------NKLHVIDLHKRYGG---HEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPS-----EGAIIVNG----QNINLVRDKDGQLKVADKNQLRLLRT-R-LTMVFQHFNLWSHMTVLENVMEAPIQVL-GLSKHDARERALKYLAKVGIDERAQG---KYPVHLSGGQQQRVSIARALAME-PDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH-QGKIEEEGDPEQVFGNP-QSPRLQQFLKGSLKKLE


General information:
TITO was launched using:
RESULT:

Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1178 27453 23.30 120.41
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 23.30
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_1B0U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B0U-query.scw
PDB file : Tito_Scwrl_1B0U.pdb: