Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYRF-QRGPVLVVVEDGRISAVDFAGSA--CPDMNLVDLGESTLLPGLVDAHAHLCWDPD--GR-PEDLAGDPHAVLVGRARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGHCWFL--------G---------------------GVADSVEELVDAVQERAARGADWIKVMATGGFVTTASDPW--QPQYGSGQLAAVVAAAEQVGLPVTAHAHATAGIAAAVAAGVDGIEHCTF-----LSEGSAAASPDVVEAIVAQGVWCGMTIPRVYP-EM-----PENLVAVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLV--------------------YLSRHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPAGLCDVKAVWRSGTQVPLQASAVGYNTPS |
| 4UB9 Chain:A ((30-479)) | ---------FFEGETIAIVGGTLIDGNGGVPVPETTVFIEDGRITKVGSTDQIEVHPNIRQIDAQGKWILPGLVNGNVHLLDGIMMMGRGGIEYLARFEGNYYKVIEEAAQIALRGGVTTVFDTWNALEPVTIARDRIASGAAEGARIFFAGTLIGMGGPFTGDFMRPSMQARTVMSRTFADRMDAMFEVGMGRHLSTLPPAEVRPLIREYLERGVDFCKIAVTDHLVGL-LGFRAPYFTFSERVLDVLVDEVRRAGVPLLTHTTSLEGLNTAIERDADLMIHATMTGQAPIPE-------ETIEKLLEKQLWSEVQPTTIAQQAWMDSVDHPFADFSGRVHHENDVRMIKAGVPLVLGTDAGCTDP----DILEDMSQGELHERPWTLGEDHFVWMQAMVEKGMDPMAAILAGTANPAKAYRKFDELGSIDVGKLGDVVVLDQDPLADITNMRTLSHVVKEGREIDFHGL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180512 for 3231 contacts (-55.9/contact) +
2D Compatibility (PS) -42124 + (NN) -22779 + (LL) 1032
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -261033.0 ( -80.79 by residue)
QMean score : 0.495
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