Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPHVITQSCCNDASCVFACPVNCIHPTPDEPGFATSEMLYIDPVACVDCGACVTACPVSAIAPNTRLDFEQLPFVEINASYYPKRPAGVKLAPTSKLAPVTPAAEVRVRRQPLTVAVVGSGPAAMYAADELLVQQGV-QVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDRIAGHRRFRFYLNVEIGK-HLGHAEL-LAHHHAVLYAVGAPDDRRLTIDGM--GLPGTGTATELVAWLNGHPDFN----DLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNSAVREVVVAARRGPAHSAFTLPELIGLTAGADVVLDPGDHQRVLDDLAIVADPLTRNKLEILSTLGDGSAPARRVGRPRIRLAYRLTPRRVLGQ-RRAGGVQFSVT----------GTDELRQLDAGLVLTSIGYRGKPIPDLPFDEQ--AALVPNDGGRVI-D-PGTGEPVPGAYVAGWIKRGPTGFIGTNKSCSMQTVQALVADFNDGRLTDPVATPTALDQLVQARQPQAIGCAGWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSAPKEPLRRRVLARLRDLGQPIVLTVPL |
| 1GTE Chain:A ((185-521)) | -------------------------------------------------------------------------------------------------------------AYSAKIALLGAGPASISCASFLAR-LGYSDITIFEKQEYVGGLSTSEI-PQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALR--------------------CGARRVFLVFRKGFVNIRAVPEEVEL------------------------------------------------AKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRD----PKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANT-TVESVNDGKQASWYIHKYIQAQ----------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -145487 for 2554 contacts (-57.0/contact) +
2D Compatibility (PS) -33209 + (NN) -22719 + (LL) 17640
1D Compatibility (HY) -7200 + (ID) 2800
Total energy: -193775.0 ( -75.87 by residue)
QMean score : 0.336
|
|
|