Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFGLRLAEAKAR-RGPLCLGIDPHPELLRGWDLATTADGLAAFCDICVRAFADF-AVVKPQVAFFESYGAAGFAVLERTIAELRAADVLVLADAKRGDIGATMSAYATAWVGDSPLAADAVTASPYLGFGSLRPLLEVAAAHGRGVFVLAATSNPEGAAVQNAAA-D-GRSVAQLVVDQVGAANEA----------------AGPGPGSIGVVVGATAPQAPDL---SAFTGPVLVPGVGVQGGRPEALGGLGGA-ASSQLLPAVAREVLRAGPGVPELRAAGERMRDAVAYLAAV |
| 4MJZ Chain:A ((29-315)) | -KNFFKTLDARIEAVDSLLTVGLDPHIADLPSPATA---ERAFVFCERIIRETLPFTCCYKPNSAFFEAFGPPGLQALERVCALI-PDDVPILLDAKRGDIGSTAQAYASSAFDA--FKADGVTVNAYMGREAVRPFLSY---RNKGVFVLVKTSNQSSNEFQTLPVR-QDVPLYVQMARVCNELAQECVSEEDSPSTTGHGLRHNASGGGVGLVVGATDIEALREVRKACPDLYILAPGVGAQGADLERALSAGLCKDGKGMLIPVSRGISRAENLAA----QANAYREQINEV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177079 for 2257 contacts (-78.5/contact) +
2D Compatibility (PS) -27704 + (NN) -10547 + (LL) 1748
1D Compatibility (HY) -12400 + (ID) 4050
Total energy: -230032.0 ( -101.92 by residue)
QMean score : 0.472
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