Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLQLRAVVADRRLDVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPDAGLVRLGDRVLTDTEAGVNVATHDRRVGLLLQDPLLFPHLSVAKNVAFGPQCRRGMFGSGRARTRASALRWLREVNAEQFADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGIRSVLRSVVARSGCAVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGARIAGV---NLVNGTIGPDGS--LRTQSGAHWYGTP--VQDLPTGHEAIAVFPPTAVAVYPEPPHGSPRNIVGLTVAEVDTRGPTVLVRGHDQPGGAPGLAACITVDAATELRVAPGSRVWFSVKAQEVALHPAPHQHASS |
| 4TQU Chain:S ((14-360)) | -------YDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVIND------LAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKR----TKKSVIDAAVKTAADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPARIAVDSTQHVELNGGNRISLLPRAGTHLAPGQEVVFGIRPEDVTLDGVE--GSERAQIKATVDIVEPLGSESILHATV---GDHSLVVKVGG----LNEVHPGDPVTLHVDLTRVHLFDAQSQA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211363 for 2588 contacts (-81.7/contact) +
2D Compatibility (PS) -37699 + (NN) -24242 + (LL) 1116
1D Compatibility (HY) -21200 + (ID) 5350
Total energy: -298738.0 ( -115.43 by residue)
QMean score : 0.430
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