Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGY--DAEPREALLAEAATCVAGVLA
3NY4 Chain:A ((2-265))-------------------------------------------LADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFAAPLVAAVLHQNPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRA--GGGYDAEPREALLAEAATCVAGVLA


General information:
TITO was launched using:
RESULT:

Template: 3NY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141836 for 2378 contacts (-59.6/contact) +
2D Compatibility (PS) -28926 + (NN) -21045 + (LL) 2424
1D Compatibility (HY) -30800 + (ID) 13000
Total energy: -233183.0 ( -98.06 by residue)
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3NY4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NY4-query.scw
PDB file : Tito_Scwrl_3NY4.pdb: