Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDELQRDFGSTVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDL-AAHVRPFGVPFIHIPATRDTRTEAEQRQLQLLS-GNVDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF
3NRB Chain:A ((4-285))--------------------------KNNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFND-EDSSKFFMRVSVEIP-----VNDFNSAFG-KVVEKYNAEWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPVTPATKAAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHSFLPGFKGAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQDVEHVSHRDSAEDLVRKGRDIERRVLSRAVLLFLEDRLIVNGERTVVF


General information:
TITO was launched using:
RESULT:

Template: 3NRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -227402 for 2195 contacts (-103.6/contact) +
2D Compatibility (PS) -29432 + (NN) -10588 + (LL) -560
1D Compatibility (HY) -25200 + (ID) 6500
Total energy: -299682.0 ( -136.53 by residue)
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_3NRB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NRB-query.scw
PDB file : Tito_Scwrl_3NRB.pdb: