Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIRWHIQLGNIVIPKSVNPMRIASNFDAFDFPRSMTEPGLVRIRKPSISQAGEMT
4OTK Chain:A ((258-304))
VLLRWNLQLGNAVVVRSARPERIASNFDVFDFELAAEHMDALGGLND---------
General information:
TITO was launched using:
RESULT:
Template:
4OTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9413 for 233 contacts (-40.4/contact) +
2D Compatibility (PS) -5059 + (NN) -1709 + (LL) 604
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -19377.0 ( -83.16 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_4OTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OTK-query.scw
PDB file :
Tito_Scwrl_4OTK.pdb
: