Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFTDYRHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQLRPGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIGDFQGTAVMNYNDLDVPYTRIHEFRHFHPERDYPTDKTVIMREYSRFAEDDDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQYLDMHMAIASALNMYDNVLAPHLRDGVPLLQDGA |
| 1I8T Chain:A ((1-367)) | ------MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGGNAYTEDC--EGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQMWG-VKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKML--EGVDVKLGIDFLKDKDSLAS--KAHRIIYTGPIDQYFDYRFGALEYRSLKFETERHEFPNFQGNAVINFTDANVPYTRIIEHKHFDYV---ETKHTVVTKEYPLEWKVGDEPYYPVNDNKNMELFKKYRELASRE---DKVIFGGRLAEYKYYDMHQVISAALYQVKNIMSTD------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166470 for 3038 contacts (-54.8/contact) +
2D Compatibility (PS) -39517 + (NN) -15366 + (LL) 1412
1D Compatibility (HY) -39200 + (ID) 8050
Total energy: -267191.0 ( -87.95 by residue)
QMean score : 0.500
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