Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
4AJ8 Chain:B ((18-92))
----------------------AGNKLVVIDFYATWCGPCKMIAP-LEEL-SQSMSDVVFLKVDVDECEDIAQDNQIAC-PTFLFMKNGQKLDSLSGA------------------
General information:
TITO was launched using:
RESULT:
Template:
4AJ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33747 for 455 contacts (-74.2/contact) +
2D Compatibility (PS) -7873 + (NN) -1128 + (LL) 3336
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -49062.0 ( -107.83 by residue)
QMean score : 0.740
(partial model without unconserved sides chains):
PDB file :
Tito_4AJ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AJ8-query.scw
PDB file :
Tito_Scwrl_4AJ8.pdb
: