Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVDTRGHIENGAVGHYQVTLKVGFRIANS
2YIZ Chain:A ((1-68))
--SNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLED-
General information:
TITO was launched using:
RESULT:
Template:
2YIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25612 for 420 contacts (-61.0/contact) +
2D Compatibility (PS) -7564 + (NN) -2205 + (LL) 152
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -44529.0 ( -106.02 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_2YIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YIZ-query.scw
PDB file :
Tito_Scwrl_2YIZ.pdb
: